PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G341300.3.p
Common NamePRUPE_ppa003517mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 567aa    MW: 61671.8 Da    PI: 6.8156
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G341300.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000284624941855
                         HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +++  L++++ +      +K + a++L +A++YIk Lq
  Prupe.1G341300.3.p 462 DRITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 494
                         6788888888887.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.76444493IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-9459502IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-8459500IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.16E-4462498No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MAEECRESTS CVAISSSSPQ LAQPNWWDLH AAAGAGAAGS QLSSWSNLGI NPWQPQPPQQ  60
QPNQKYSNSS NNCDDVDQDV SISSTSFTNA SNHSSLSVDS SRRLQVADQR SASPNNDMIN  120
GEQVSDNHIW NHVLLSVNGN SDLHHNDHDV GENFLDALSS KSLSTDHVMY EPACDYLKKL  180
DNSTWEFTKY VSAASNNFNS FEKQLNGGFM ENNNMNNNVN IENERLTKLS NLVSTWSIAP  240
PEPQLVMDHD HHHYLKPQAF INNDSTSCDA QMGNNNITNR NSGSSLFSCY GSKVEAACVA  300
GGGGGGALHG ITPSFGNNTN GIEYQIGLNN VNAMVADHHN GKYFYGNGSI LPDSYSSCGA  360
TSAGARNFAD VISFSSRLGN KSALVDIHAP KPCFKSSNLS DQYSKKQASS TRVSSGRGQG  420
IANEGKKKRT DDTSSETVLK KPKQETSTVS SSVKAPKVKL GDRITALQQI VSPFGKTDTA  480
SVLYEAIQYI KFLQDQVHVL LSSPYLKTNS HKDPWATDRK DHKGDAKVDL KNKGLCLVPI  540
SCTPQVYREN TGSDYWTPTY RGCLYR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007222467.10.0hypothetical protein PRUPE_ppa003517mg
TrEMBLM5XDY80.0M5XDY8_PRUPE; Uncharacterized protein
STRINGVIT_01s0010g02070.t011e-157(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.19e-57bHLH family protein